Installation¶

Prerequisites¶

MRF-CRBLoss is a Python package allowing to estimate biophysical parameters from MRF scans. In the following, we describe the steps to follow to get a correct environment to use our package.

conda prerequisites¶

Install Conda. We typically use the Miniconda Python distribution. Use Python version >=3.7.
Create a new conda environment:
```
conda create -n mrf-env python=3.7
```
Activate your environment:
```
source activate mrf-env
```

python prerequisites¶

Install Python, we prefer the pyenv version management system, along with pyenv-virtualenv.
Install PyTorch. If you have an Nvidia GPU, be sure to install a version of PyTorch that supports it.

Downloading the package¶

clone the repository:

git clone https://github.com/quentin-duchemin/MRF-CRBLoss.git

install the required python packages in the virtualenv:
```
pip install -r requirements_MRF.txt
```

Presentation of the project Documentation